The Coulomb-Higgs transition of the three-parameter U(1)-Higgs model

We find a first order Coulomb--Higgs phase transition at moderately large values of the coupling $\lambda$, and no evidence for a change of order at any finite value of it.Comment: 3 pages, uuencoded compressed ps file. Contribution to Lattice '9

WHAT IS THE LENGTH OF A SNAKE?

The way that herpetologists have traditionally measuredlive snakes is by stretching them on a ruler andrecording the total length (TL). However, due to the thinconstitution of the snake, the large number of intervertebraljoints, and slim muscular mass of most snakes,it is easier to stretch a snake than it is to stretch anyother vertebrate. The result of this is that the length ofa snake recorded is infl uenced by how much the animalis stretched. Stretching it as much as possible is perhapsa precise way to measure the length of the specimenbut it might not correspond to the actual length ofa live animal. Furthermore, it may seriously injure a livesnake. Another method involves placing the snake in aclear plexiglass box and pressing it with a soft materialsuch as rubber foam against a clear surface. Measuringthe length of the snake may be done by outlining itsbody with a string (Fitch 1987; Frye 1991). However, thismethod is restricted to small animals that can be placedin a box, and in addition, no indications of accuracy of thetechnique are given. Measuring the snakes with a fl exibletape has also been reported (Blouin-Demers 2003)but when dealing with a large animals the way the tapeis positioned can produce great variance on the fi nal outcome.In this contribution we revise alternative ways tomeasuring a snake and propose a method that offers repeatableresults. We further analyze the precision of thismethod by using a sample of measurements taken fromwild populations of green anacondas (Eunectes murinus)with a large range of sizes

Unfolding Rates for the Diffusion-Collision Model

In the diffusion-collision model, the unfolding rates are given by the likelihood of secondary structural cluster dissociation. In this work, we introduce an unfolding rate calculation for proteins whose secondary structural elements are $\alpha$-helices, modeled from thermal escape over a barrier which arises from the free energy in buried hydrophobic residues. Our results are in good agreement with currently accepted values for the attempt rate.Comment: Shorter version of cond-mat/0011024 accepted for publication in PR

Molecular evolution of aphids and their primary ( Buchnera sp.) and secondary endosymbionts: implications for the role of symbiosis in insect evolution.

Aphids maintain an obligate, endosymbiotic association with Buchnera sp., a bacterium closely related to Escherichia coli. Bacteria are housed in specialized cells of organ-like structures called bacteriomes in the hemocoel of the aphid and are maternally transmitted. Phylogenetic studies have shown that the association had a single origin, dated about 200-250 million years ago, and that host and endosymbiont lineages have evolved in parallel since then. However, the pattern of deepest branching within the aphid family remains unsolved, which thereby hampers tin appraisal of, for example, the role played by horizontal gene transfer in the early evolution of Buchnera. The main role of Buchnera in this association is the biosynthesis and provisioning of essential amino acids to its aphid host. Physiological and metabolic studies have recently substantiated such nutritional role. In addition, genetic studies of Buchnera from several aphids have shown additional modifications, such as strong genome reduction, high A+T content compared to free-living bacteria, differential evolutionary rates, a relative increase in the number of non-synonymous substitutions, and gene amplification mediated by plasmids. Symbiosis is an active process in insect evolution cis revealed by the intermediate values of the previous characteristics showed by secondary symbionts compared to free-living bacteria and Buchnera

The high-pressure behavior of CaMoO4

We report a high-pressure study of tetragonal scheelite-type CaMoO4 up to 29 GPa. In order to characterize its high-pressure behavior, we have combined Raman and optical-absorption measurements with density-functional theory calculations. We have found evidence of a pressure-induced phase transition near 15 GPa. Experiments and calculations agree in assigning the high-pressure phase to a monoclinic fergusonite-type structure. The reported results are consistent with previous powder x-ray-diffraction experiments, but are in contradiction with the conclusions obtained from earlier Raman measurements, which support the existence of more than one phase transition in the pressure range covered by our studies. The observed scheelite-fergusonite transition induces significant changes in the electronic band gap and phonon spectrum of CaMoO4. We have determined the pressure evolution of the band gap for the low- and high-pressure phases as well as the frequencies and pressure dependences of the Raman-active and infrared-active modes. In addition, based upon calculations of the phonon dispersion of the scheelite phase, carried out at a pressure higher than the transition pressure, we propose a possible mechanism for the reported phase transition. Furthermore, from the calculations we determined the pressure dependence of the unit-cell parameters and atomic positions of the different phases and their room-temperature equations of state. These results are compared with previous experiments showing a very good agreement. Finally, information on bond compressibility is reported and correlated with the macroscopic compressibility of CaMoO4. The reported results are of interest for the many technological applications of this oxide.Comment: 36 pages, 10 figures, 8 table

Effect of frictional heat dissipation on the loss of soil strength

In the present paper through a shear test on a fully saturated granular medium, simulated by the discrete element method, the effect of the heat produced by friction on the internal pore water pressure is explored. It is found that the dissipated energy is enough to increase the pore pressure and reduce the soil strength. In adiabatic and impermeable conditions the heat builds up quickly inside the shear band, and the softening is more pronounced. It is found as well that for real geological materials, heat conduction is not enough to reduce the pore pressure, and the softening prevails. Nevertheless, it is observed that the hydraulic conduction may mitigate or completely eliminate the temperature growth inside the shear band. This result provides new understanding on the thermodynamic factors involved in the onset of catastrophic landslides